EnhancerDB
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  3. rs551419941[chr6:112311519]
Enhancers that have rs551419941[chr6:112311519]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 112291245 112321335 enh23518
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen
chr6 112311135 112311681 vista53166
VISTA
Transcript factors that have rs551419941[chr6:112311519]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 112311509 112311519 MEF2A JASPAR yes 70419520
chr6 112311509 112311519 MEF2A JASPAR yes 104394967
chr6 112311513 112311533 ESR1 JASPAR yes 70419522
chr6 112311513 112311533 ESR1 JASPAR yes 104394969
chr6 112311515 112311535 PPARG JASPAR yes 70419524
chr6 112311515 112311535 PPARG JASPAR yes 104394971
chr6 112311516 112311525 THAP1 JASPAR yes 70419525
chr6 112311516 112311525 THAP1 JASPAR yes 104394972
chr6 112311516 112311534 ESR2 JASPAR yes 70419526
chr6 112311516 112311534 ESR2 JASPAR yes 104394973
chr6 112311516 112311536 PPARG JASPAR yes 70419527
chr6 112311516 112311536 PPARG JASPAR yes 104394974
chr6 112311517 112311534 ESR1 JASPAR yes 70419528
chr6 112311517 112311534 ESR1 JASPAR yes 104394975
chr6 112311518 112311533 ESR2 JASPAR yes 70419529
chr6 112311518 112311533 ESR2 JASPAR yes 104394976
chr6 112311518 112311538 ESR1 JASPAR yes 70419530
chr6 112311518 112311538 ESR1 JASPAR yes 104394977
chr6 112311519 112311523 LFA1 TRANSFAC yes 70419531
chr6 112311519 112311523 LFA1 TRANSFAC yes 104394978
Genes associated with rs551419941[chr6:112311519], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More