EnhancerDB
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  3. rs551434719[chr12:52518980]
Enhancers that have rs551434719[chr12:52518980]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52508085 52522855 enh2356
Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs551434719[chr12:52518980]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52513207 52519034 P63 GTRD no Skin (Keratinocyte) 21546171
chr12 52518275 52519891 AR GTRD no Prostate (PC-3) 21546230
chr12 52518966 52518983 RARA JASPAR yes 120919408
chr12 52518966 52518983 RXRA JASPAR yes 120919409
chr12 52518978 52518982 ESR1 TRANSFAC yes 120919410
Genes associated with rs551434719[chr12:52518980], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More