EnhancerDB
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  3. rs551449259[chr17:65478199]
Enhancers that have rs551449259[chr17:65478199]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65460484 65480775 enh32309
Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Kidney Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Spleen Muscle (Myotube) Lung Muscle (A673) Heart
chr17 65477756 65478333 vista25646
VISTA
Transcript factors that have rs551449259[chr17:65478199]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65477877 65478473 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21782279
chr17 65477877 65478473 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108285952
chr17 65478054 65478344 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21782280
chr17 65478054 65478344 NFATC1 UCSC Txn Factor no Conserved 108285953
chr17 65478054 65478344 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108285954
chr17 65478186 65478200 JUN JASPAR yes 21280020
chr17 65478186 65478200 JUN JASPAR yes 55509895
chr17 65478188 65478199 BATF JASPAR yes 21280021
chr17 65478188 65478199 DUX4 JASPAR yes 21280022
chr17 65478188 65478199 BATF JASPAR yes 55509896
chr17 65478188 65478199 DUX4 JASPAR yes 55509897
chr17 65478191 65478205 JUN JASPAR yes 21280023
chr17 65478191 65478205 JUN JASPAR yes 55509898
chr17 65478198 65478209 FOXC1 JASPAR yes 21280025
chr17 65478198 65478209 FOXC1 JASPAR yes 55509900
chr17 65478199 65478203 YY1 TRANSFAC yes 21280026
chr17 65478199 65478203 YY1 TRANSFAC yes 55509901
Genes associated with rs551449259[chr17:65478199], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More