EnhancerDB
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  3. rs551713161[chr1:225794563]
Enhancers that have rs551713161[chr1:225794563]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225783583 225807972 enh43160
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Lung Stomach Muscle (A673) Colon (HCT116) Uterus Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs551713161[chr1:225794563]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225794543 225794564 IRF1 JASPAR yes 35754630
chr1 225794544 225794565 IRF1 JASPAR yes 35754632
chr1 225794545 225794566 IRF1 JASPAR yes 35754634
chr1 225794546 225794567 IRF1 JASPAR yes 35754636
chr1 225794547 225794568 IRF1 JASPAR yes 35754638
chr1 225794548 225794563 FOXP1 JASPAR yes 35754639
chr1 225794548 225794569 IRF1 JASPAR yes 35754640
chr1 225794549 225794564 FOXP1 JASPAR yes 35754641
chr1 225794549 225794570 IRF1 JASPAR yes 35754642
chr1 225794550 225794565 FOXP1 JASPAR yes 35754643
chr1 225794550 225794571 IRF1 JASPAR yes 35754644
chr1 225794551 225794566 FOXP1 JASPAR yes 35754645
chr1 225794551 225794572 IRF1 JASPAR yes 35754646
chr1 225794552 225794567 FOXP1 JASPAR yes 35754647
chr1 225794552 225794573 IRF1 JASPAR yes 35754648
chr1 225794553 225794568 FOXP1 JASPAR yes 35754649
chr1 225794553 225794574 IRF1 JASPAR yes 35754650
chr1 225794554 225794569 FOXP1 JASPAR yes 35754651
chr1 225794555 225794570 FOXP1 JASPAR yes 35754652
chr1 225794555 225794576 IRF1 JASPAR yes 35754653
chr1 225794556 225794571 FOXP1 JASPAR yes 35754654
chr1 225794556 225794577 IRF1 JASPAR yes 35754655
chr1 225794557 225794572 FOXP1 JASPAR yes 35754656
Genes associated with rs551713161[chr1:225794563], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More