EnhancerDB
  1. Home
  2. SNP
  3. rs551873654[chr5:172278216]
Enhancers that have rs551873654[chr5:172278216]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs551873654[chr5:172278216]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172278201 172278216 FOXP1 JASPAR yes 67834676
chr5 172278202 172278217 FOXP1 JASPAR yes 67834677
chr5 172278202 172278223 IRF1 JASPAR yes 67834678
chr5 172278203 172278218 FOXP1 JASPAR yes 67834679
chr5 172278203 172278224 IRF1 JASPAR yes 67834680
chr5 172278204 172278219 FOXP1 JASPAR yes 67834681
chr5 172278204 172278225 IRF1 JASPAR yes 67834682
chr5 172278205 172278220 FOXP1 JASPAR yes 67834683
chr5 172278205 172278226 IRF1 JASPAR yes 67834684
chr5 172278206 172278221 FOXP1 JASPAR yes 67834685
chr5 172278207 172278222 FOXP1 JASPAR yes 67834686
chr5 172278207 172278228 IRF1 JASPAR yes 67834687
chr5 172278208 172278223 FOXP1 JASPAR yes 67834688
chr5 172278208 172278229 IRF1 JASPAR yes 67834689
chr5 172278209 172278224 FOXP1 JASPAR yes 67834690
chr5 172278214 172278235 IRF1 JASPAR yes 67834691
Genes associated with rs551873654[chr5:172278216], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More