EnhancerDB
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  3. rs551926412[chr17:48960018]
Enhancers that have rs551926412[chr17:48960018]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48954425 48973436 enh32228
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs551926412[chr17:48960018]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48960017 48960023 LEF1 TRANSFAC yes 54728473
chr17 48960017 48960023 SOX10 JASPAR yes 54728474
chr17 48960017 48960032 FOXP1 JASPAR yes 54728475
chr17 48960018 48960030 FOXC2 JASPAR yes 54728476
chr17 48960018 48960032 FOXF2 JASPAR yes 54728477
Genes associated with rs551926412[chr17:48960018], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More