EnhancerDB
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  3. rs551990670[chr1:52028756]
Enhancers that have rs551990670[chr1:52028756]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52027839 52037840 enh360
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Heart
Transcript factors that have rs551990670[chr1:52028756]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52028746 52028758 HES5 JASPAR yes 28851075
chr1 52028746 52028758 HES7 JASPAR yes 28851076
chr1 52028747 52028757 BHLHE40 JASPAR yes 28851077
chr1 52028747 52028757 BHLHE41 JASPAR yes 28851078
chr1 52028747 52028757 HEY1 JASPAR yes 28851079
chr1 52028747 52028757 HEY2 JASPAR yes 28851080
chr1 52028747 52028757 MAX JASPAR yes 28851081
chr1 52028747 52028757 MNT JASPAR yes 28851082
chr1 52028747 52028757 TFE3 JASPAR yes 28851083
chr1 52028747 52028757 TFEB JASPAR yes 28851084
Genes associated with rs551990670[chr1:52028756], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More