EnhancerDB
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  3. rs552000845[chr17:2114079]
Enhancers that have rs552000845[chr17:2114079]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2090104 2130255 enh4208
Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs552000845[chr17:2114079]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2114058 2114079 IRF1 JASPAR yes 52737912
chr17 2114063 2114084 IRF1 JASPAR yes 52737916
chr17 2114064 2114079 FOXP1 JASPAR yes 52737917
Genes associated with rs552000845[chr17:2114079], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More