EnhancerDB
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  3. rs552008518[chr1:236083719]
Enhancers that have rs552008518[chr1:236083719]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 236062005 236089295 enh12805
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs552008518[chr1:236083719]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 236083295 236083835 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21403929
chr1 236083295 236083835 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107886252
chr1 236083363 236083807 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21403930
chr1 236083363 236083807 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107886253
chr1 236083393 236083909 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403932
chr1 236083393 236083909 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107886255
chr1 236083396 236083926 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21403933
chr1 236083396 236083926 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107886256
chr1 236083430 236083754 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107886257
chr1 236083438 236084808 P63 GTRD no Skin (Keratinocyte) 21403934
chr1 236083438 236084808 P63 GTRD no Skin (Keratinocyte) 107886258
chr1 236083440 236083730 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107886259
chr1 236083441 236083725 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21403935
chr1 236083441 236083725 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107886260
chr1 236083442 236084742 P63 GTRD no Skin (Keratinocyte) 21403936
chr1 236083442 236084742 P63 GTRD no Skin (Keratinocyte) 107886261
chr1 236083477 236083733 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107886264
chr1 236083505 236084593 P63 GTRD no Skin (Keratinocyte) 21403939
chr1 236083505 236084593 P63 GTRD no Skin (Keratinocyte) 107886266
chr1 236083526 236084440 P63 GTRD no Skin (Keratinocyte) 21403940
chr1 236083526 236084440 P63 GTRD no Skin (Keratinocyte) 107886267
chr1 236083609 236083974 SOX2 GTRD no Neural Stem Cells (H9) 21403941
chr1 236083609 236083974 SOX2 GTRD no Neural Stem Cells (H9) 107886268
chr1 236083617 236084403 ZBTB33 GTRD no Brain (SK-N-SH) 21403942
chr1 236083617 236084403 ZBTB33 GTRD no Brain (SK-N-SH) 107886269
Genes associated with rs552008518[chr1:236083719], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More