EnhancerDB
  1. Home
  2. SNP
  3. rs552039679[chr11:9633570]
Enhancers that have rs552039679[chr11:9633570]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 9615493 9643875 enh1632
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs552039679[chr11:9633570]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 9633563 9633575 FOXC2 JASPAR yes 37255867
chr11 9633566 9633581 FOXP1 JASPAR yes 37255869
chr11 9633566 9633587 IRF1 JASPAR yes 37255870
Genes associated with rs552039679[chr11:9633570], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More