EnhancerDB
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  3. rs552042347[chr19:784459]
Enhancers that have rs552042347[chr19:784459]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 774584 785655 enh17836
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Placenta Thyroid Uterus Lung (PC-9) Neural Stem Cells (H9) Stomach
Transcript factors that have rs552042347[chr19:784459]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 781650 785153 ZBTB33 GTRD no Lung (A549) 108346494
chr19 783130 785017 ZNF274 GTRD no Cervix (HeLa-S3) 21829965
chr19 784245 785326 ZNF274 GTRD no Cervix (HeLa-S3) 21829985
chr19 784263 785028 ZNF274 GTRD no Cervix (HeLa-S3) 21829986
chr19 784291 785097 ZNF274 GTRD no Cervix (HeLa-S3) 21829987
chr19 784318 785292 ZNF274 GTRD no Cervix (HeLa-S3) 21829988
chr19 784343 784906 ZNF274 GTRD no Cervix (HeLa-S3) 21829989
chr19 784360 784980 ZNF274 GTRD no Cervix (HeLa-S3) 21829990
chr19 784370 785022 ZNF274 GTRD no Cervix (HeLa-S3) 21829991
chr19 784407 784983 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21829992
chr19 784438 785015 ZNF274 GTRD no Cervix (HeLa-S3) 21829993
chr19 784456 784471 FOXP1 JASPAR yes 111976871
chr19 784457 784472 FOXP1 JASPAR yes 111976872
chr19 784458 784473 FOXP1 JASPAR yes 111976873
chr19 784459 784474 FOXP1 JASPAR yes 111976874
chr19 784459 784480 IRF1 JASPAR yes 111976875
Genes associated with rs552042347[chr19:784459], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More