EnhancerDB
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  3. rs552064464[chr1:204265262]
Enhancers that have rs552064464[chr1:204265262]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204245511 204275535 enh12577
Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 204261217 204266185 vista127
VISTA
Transcript factors that have rs552064464[chr1:204265262]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204265253 204265263 SP1 JASPAR yes 34689828
chr1 204265253 204265263 SP1 JASPAR yes 71155815
chr1 204265260 204265264 H4TF2 TRANSFAC yes 34689829
chr1 204265260 204265264 H4TF2 TRANSFAC yes 71155816
chr1 204265262 204265272 POU6F2 JASPAR yes 34689830
chr1 204265262 204265272 POU6F2 JASPAR yes 71155817
Genes associated with rs552064464[chr1:204265262], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More