EnhancerDB
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  3. rs552072210[chr17:862180]
Enhancers that have rs552072210[chr17:862180]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 845785 881195 enh32038
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs552072210[chr17:862180]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 862170 862185 STAT2 JASPAR yes 52645483
chr17 862178 862184 HiNF-A TRANSFAC yes 52645484
chr17 862179 862199 RREB1 JASPAR yes 52645485
Genes associated with rs552072210[chr17:862180], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More