EnhancerDB
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  3. rs552072710[chr3:185483209]
Enhancers that have rs552072710[chr3:185483209]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 185460642 185522464 enh21175
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552072710[chr3:185483209]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 185483201 185483213 NHLH1 JASPAR yes 8286173
chr3 185483202 185483211 SNAI2 JASPAR yes 8286174
chr3 185483202 185483212 ID4 JASPAR yes 8286175
chr3 185483202 185483212 NHLH1 JASPAR yes 8286176
chr3 185483202 185483212 TCF3 JASPAR yes 8286177
chr3 185483202 185483212 TCF4 JASPAR yes 8286178
chr3 185483204 185483213 ZEB1 JASPAR yes 8286179
Genes associated with rs552072710[chr3:185483209], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More