EnhancerDB
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  3. rs552088804[chr1:225802511]
Enhancers that have rs552088804[chr1:225802511]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225783583 225807972 enh43160
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Lung Stomach Muscle (A673) Colon (HCT116) Uterus Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs552088804[chr1:225802511]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225802497 225802513 SRF JASPAR yes 35756159
chr1 225802505 225802513 FOXL1 JASPAR yes 35756160
chr1 225802509 225802513 YY1 TRANSFAC yes 35756161
Genes associated with rs552088804[chr1:225802511], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More