EnhancerDB
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  3. rs552147071[chr17:80503456]
Enhancers that have rs552147071[chr17:80503456]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552147071[chr17:80503456]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80503450 80503471 IRF1 JASPAR yes 56372976
chr17 80503453 80503474 IRF1 JASPAR yes 56372977
chr17 80503454 80503475 IRF1 JASPAR yes 56372978
chr17 80503455 80503470 FOXP1 JASPAR yes 56372979
chr17 80503455 80503476 IRF1 JASPAR yes 56372980
chr17 80503456 80503471 FOXP1 JASPAR yes 56372981
Genes associated with rs552147071[chr17:80503456], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More