EnhancerDB
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  3. rs552149971[chr7:130574888]
Enhancers that have rs552149971[chr7:130574888]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 130555356 130592615 enh10036
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552149971[chr7:130574888]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 130574870 130574889 PAX5 JASPAR yes 18032950
chr7 130574878 130574891 SMAD2 JASPAR yes 18032951
Genes associated with rs552149971[chr7:130574888], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More