EnhancerDB
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  3. rs552169800[chr17:65468054]
Enhancers that have rs552169800[chr17:65468054]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65460484 65480775 enh32309
Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Kidney Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Spleen Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs552169800[chr17:65468054]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65468042 65468057 PRDM1 JASPAR yes 55508307
chr17 65468051 65468055 NFE TRANSFAC yes 55508308
Genes associated with rs552169800[chr17:65468054], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More