EnhancerDB
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  3. rs552197917[chr1:181064550]
Enhancers that have rs552197917[chr1:181064550]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 181061310 181091955 enh12430
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552197917[chr1:181064550]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 181063813 181065060 ZNF274 GTRD no Bone Marrow (K562) 21354304
chr1 181063990 181064874 ZNF274 GTRD no Bone Marrow (K562) 21354305
chr1 181064222 181064722 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21354311
chr1 181064354 181064676 ZNF143 GTRD no Epithelial (MCF-7) 21354312
chr1 181064547 181064556 HIC2 JASPAR yes 33551794
chr1 181064550 181064554 LFA1 TRANSFAC yes 33551795
Genes associated with rs552197917[chr1:181064550], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More