EnhancerDB
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  3. rs552212452[chr17:57845308]
Enhancers that have rs552212452[chr17:57845308]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57820705 57849586 enh4505
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs552212452[chr17:57845308]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57845302 57845317 MEF2C JASPAR yes 55079473
chr17 57845303 57845318 MEF2A JASPAR yes 55079474
chr17 57845304 57845316 MEF2A JASPAR yes 55079475
chr17 57845304 57845316 MEF2B JASPAR yes 55079476
chr17 57845304 57845316 MEF2D JASPAR yes 55079477
Genes associated with rs552212452[chr17:57845308], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More