EnhancerDB
  1. Home
  2. SNP
  3. rs552213808[chr1:171408461]
Enhancers that have rs552213808[chr1:171408461]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs552213808[chr1:171408461]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171408457 171408475 SRF JASPAR yes 33081226
chr1 171408458 171408479 IRF1 JASPAR yes 33081227
chr1 171408460 171408475 STAT2 JASPAR yes 33081228
Genes associated with rs552213808[chr1:171408461], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More