EnhancerDB
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  3. rs552227505[chr17:57820920]
Enhancers that have rs552227505[chr17:57820920]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57820705 57849586 enh4505
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs552227505[chr17:57820920]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57820917 57820932 PRDM1 JASPAR yes 55075462
chr17 57820918 57820939 ZNF263 JASPAR yes 55075463
chr17 57820920 57820941 ZNF263 JASPAR yes 55075464
Genes associated with rs552227505[chr17:57820920], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More