EnhancerDB
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  3. rs552238594[chr1:8250738]
Enhancers that have rs552238594[chr1:8250738]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8240061 8281055 enh11465
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552238594[chr1:8250738]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8250734 8250740 TBP TRANSFAC yes 26525149
chr1 8250735 8250749 ONECUT2 JASPAR yes 26525150
chr1 8250735 8250749 ONECUT3 JASPAR yes 26525151
chr1 8250735 8250750 FOXP1 JASPAR yes 26525152
chr1 8250736 8250751 FOXA1 JASPAR yes 26525153
chr1 8250737 8250748 FOXB1 JASPAR yes 26525154
chr1 8250737 8250748 FOXC1 JASPAR yes 26525155
chr1 8250737 8250749 FOXC2 JASPAR yes 26525156
chr1 8250738 8250750 FOXI1 JASPAR yes 26525157
Genes associated with rs552238594[chr1:8250738], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More