EnhancerDB
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  3. rs552243861[chr12:125194129]
Enhancers that have rs552243861[chr12:125194129]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552243861[chr12:125194129]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125193448 125194457 ZBTB33 GTRD no Lung (A549) 21582106
chr12 125193459 125194565 ZBTB33 GTRD no Lung (A549) 21582107
chr12 125193566 125194350 ZNF143 GTRD no Epithelial (MCF-7) 21582108
chr12 125193572 125194473 ZNF274 GTRD no Cervix (HeLa-S3) 21582109
chr12 125193584 125194533 ZBTB33 GTRD no Lung (A549) 21582110
chr12 125193643 125194578 ZNF143 GTRD no Epithelial (MCF-7) 21582111
chr12 125193646 125194521 ZNF274 GTRD no Bone Marrow (K562) 21582112
chr12 125193672 125194367 ZNF143 GTRD no Epithelial (MCF-7) 21582114
chr12 125193719 125194154 ZNF143 GTRD no Epithelial (MCF-7) 21582115
chr12 125193719 125194629 ZBTB33 GTRD no Lung (A549) 21582116
chr12 125193739 125194297 ZNF143 GTRD no Epithelial (MCF-7) 21582117
chr12 125193758 125194657 ZBTB33 GTRD no Lung (A549) 21582118
chr12 125193766 125194191 ZNF274 GTRD no Liver (HepG2) 21582119
chr12 125193773 125194287 ZBTB33 GTRD no Lung (A549) 21582120
chr12 125193793 125194233 ZNF274 GTRD no Liver (HepG2) 21582122
chr12 125193793 125195570 ZBTB33 GTRD no Brain (SK-N-SH) 21582123
chr12 125193794 125194197 ZNF274 GTRD no Bone Marrow (K562) 21582124
chr12 125193797 125194576 ZNF143 GTRD no Epithelial (MCF-7) 21582125
chr12 125193837 125194197 ZNF143 GTRD no Epithelial (MCF-7) 21582126
chr12 125193838 125194173 ZNF143 GTRD no Epithelial (MCF-7) 21582127
chr12 125193839 125194219 ZNF274 GTRD no Bone Marrow (K562) 21582128
chr12 125193858 125194214 ZNF274 GTRD no Cervix (HeLa-S3) 21582129
chr12 125193859 125194333 ZNF274 GTRD no Bone Marrow (K562) 21582130
chr12 125193869 125194165 ZNF274 GTRD no Bone Marrow (K562) 21582132
chr12 125193875 125194166 ZNF274 GTRD no Cervix (HeLa-S3) 21582133
chr12 125193903 125194739 ZBTB33 GTRD no Brain (SK-N-SH) 21582134
chr12 125193916 125194533 ZBTB33 GTRD no Brain (SK-N-SH) 21582135
chr12 125193930 125194667 ZNF274 GTRD no Bone Marrow (K562) 21582136
chr12 125193959 125194798 TCF7L2 GTRD no Colon (HCT116) 21582137
chr12 125194052 125194608 ZBTB33 GTRD no Brain (SK-N-SH) 21582138
chr12 125194064 125194659 ZBTB33 GTRD no Brain (SK-N-SH) 21582139
chr12 125194072 125194540 ZBTB33 GTRD no Brain (SK-N-SH) 21582140
chr12 125194091 125194682 ZBTB33 GTRD no Brain (SK-N-SH) 21582141
chr12 125194108 125194493 ZNF274 GTRD no Bone Marrow (K562) 21582142
chr12 125194110 125194653 ZBTB33 GTRD no Brain (SK-N-SH) 21582143
chr12 125194111 125194129 ESR2 JASPAR yes 124411707
Genes associated with rs552243861[chr12:125194129], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More