EnhancerDB
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  3. rs552250990[chr1:41881984]
Enhancers that have rs552250990[chr1:41881984]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41849805 41888800 enh11788
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs552250990[chr1:41881984]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41881978 41881984 YY1 JASPAR yes 28387559
chr1 41881982 41881988 MZF1 JASPAR yes 28387560
chr1 41881984 41881994 ID4 JASPAR yes 28387561
Genes associated with rs552250990[chr1:41881984], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More