EnhancerDB
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  3. rs552274856[chr6:16346696]
Enhancers that have rs552274856[chr6:16346696]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16329544 16348350 enh8975
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552274856[chr6:16346696]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16346692 16346704 NHLH1 JASPAR yes 100290600
chr6 16346693 16346703 MSC JASPAR yes 100290601
chr6 16346693 16346703 NHLH1 JASPAR yes 100290602
Genes associated with rs552274856[chr6:16346696], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More