EnhancerDB
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  3. rs552275632[chr17:80497971]
Enhancers that have rs552275632[chr17:80497971]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552275632[chr17:80497971]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80497967 80497971 H1TF2 TRANSFAC yes 56372244
chr17 80497967 80497971 NFE TRANSFAC yes 56372245
chr17 80497967 80497971 SRF TRANSFAC yes 56372246
Genes associated with rs552275632[chr17:80497971], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More