EnhancerDB
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  3. rs552287576[chr16:69101122]
Enhancers that have rs552287576[chr16:69101122]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 69081060 69101258 enh31894
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Colon (HCT116) Thyroid Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs552287576[chr16:69101122]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 69101110 69101125 FOXP1 JASPAR yes 11245256
chr16 69101115 69101125 HOXA13 JASPAR yes 11245257
chr16 69101115 69101125 HOXB13 JASPAR yes 11245258
chr16 69101115 69101125 HOXD13 JASPAR yes 11245259
chr16 69101115 69101126 HOXA10 JASPAR yes 11245260
chr16 69101115 69101126 HOXC13 JASPAR yes 11245261
chr16 69101116 69101125 CDX1 JASPAR yes 11245262
chr16 69101116 69101126 MNX1 JASPAR yes 11245263
chr16 69101116 69101127 CDX2 JASPAR yes 11245264
chr16 69101117 69101135 MAFF JASPAR yes 11245265
Genes associated with rs552287576[chr16:69101122], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More