EnhancerDB
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  3. rs552307876[chr1:33458851]
Enhancers that have rs552307876[chr1:33458851]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 33442929 33472683 enh216
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Heart
chr1 33458800 33459074 vista1139
VISTA
Transcript factors that have rs552307876[chr1:33458851]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 33458065 33459049 TCF7L2 GTRD no Colon (HCT116) 107802791
chr1 33458848 33458853 SP1 TRANSFAC yes 28020475
chr1 33458848 33458853 SP1 TRANSFAC yes 118269500
Genes associated with rs552307876[chr1:33458851], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More