EnhancerDB
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  3. rs552311498[chr12:120667072]
Enhancers that have rs552311498[chr12:120667072]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 120660005 120685163 enh2636
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552311498[chr12:120667072]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 120665990 120669835 POLR2A UCSC Txn Factor no Conserved 108063015
chr12 120665990 120669835 POLR2A UCSC Txn Factor no Conserved 108063016
chr12 120665990 120669835 POLR2A UCSC Txn Factor no Conserved 108063017
chr12 120666292 120667365 TCF7L2 GTRD no Colon (HCT116) 21578307
chr12 120666292 120667365 TCF7L2 GTRD no Colon (HCT116) 108063018
chr12 120666528 120667105 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21578312
chr12 120666528 120667105 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108063023
chr12 120666562 120667162 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21578315
chr12 120666562 120667162 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108063026
chr12 120666595 120667484 TCF7L2 GTRD no Colon (HCT116) 21578318
chr12 120666595 120667484 TCF7L2 GTRD no Colon (HCT116) 108063029
chr12 120666628 120667298 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21578321
chr12 120666628 120667298 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108063032
chr12 120666630 120667254 TEAD4 UCSC Txn Factor no Conserved 108063034
chr12 120666644 120667180 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21578324
chr12 120666644 120667180 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108063037
chr12 120666680 120667340 TCF7L2 GTRD no Colon (HCT116) 21578331
chr12 120666680 120667340 TCF7L2 GTRD no Colon (HCT116) 108063046
chr12 120666809 120667165 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21578351
chr12 120666809 120667165 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108063067
chr12 120666891 120667407 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21578353
chr12 120666891 120667407 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108063069
chr12 120666899 120667259 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21578354
chr12 120666899 120667259 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108063070
chr12 120666902 120667248 TCF7L2 GTRD no Colon (HCT116) 21578355
chr12 120666902 120667248 TCF7L2 GTRD no Colon (HCT116) 108063071
Genes associated with rs552311498[chr12:120667072], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More