EnhancerDB
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  3. rs552317546[chr17:55979566]
Enhancers that have rs552317546[chr17:55979566]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55962618 55979623 enh17245
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Uterus Thyroid Adrenal Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Heart
chr17 55979553 55979719 vista25264
VISTA
Transcript factors that have rs552317546[chr17:55979566]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55979471 55979987 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773837
chr17 55979471 55979987 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274727
chr17 55979501 55979797 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773838
chr17 55979501 55979797 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274728
chr17 55979511 55979763 ESR1 UCSC Txn Factor no Conserved 108274729
chr17 55979512 55979868 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773839
chr17 55979512 55979868 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274730
chr17 55979514 55979924 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773840
chr17 55979514 55979924 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274731
chr17 55979517 55979841 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773841
chr17 55979517 55979841 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274732
chr17 55979517 55979915 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773842
chr17 55979517 55979915 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274733
chr17 55979545 55979835 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773843
chr17 55979545 55979835 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274734
chr17 55979546 55979866 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773844
chr17 55979546 55979866 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274735
chr17 55979547 55979894 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773845
chr17 55979547 55979894 RUNX3 UCSC Txn Factor no Conserved 108274736
chr17 55979547 55979894 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274737
chr17 55979550 55979571 IRF1 JASPAR yes 21261179
chr17 55979550 55979571 IRF1 JASPAR yes 54997150
chr17 55979550 55979811 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773846
chr17 55979550 55979811 PAX5 UCSC Txn Factor no Conserved 108274738
chr17 55979550 55979811 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274739
chr17 55979551 55979806 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773847
chr17 55979551 55979806 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274740
chr17 55979553 55979568 FOXP1 JASPAR yes 21261180
chr17 55979553 55979568 FOXP1 JASPAR yes 54997151
chr17 55979554 55979569 STAT2 JASPAR yes 21261181
chr17 55979554 55979569 STAT2 JASPAR yes 54997152
chr17 55979555 55979570 FOXP1 JASPAR yes 21261182
chr17 55979555 55979570 FOXP1 JASPAR yes 54997153
chr17 55979555 55979576 IRF1 JASPAR yes 21261183
chr17 55979555 55979576 IRF1 JASPAR yes 54997154
chr17 55979556 55979577 IRF1 JASPAR yes 21261184
chr17 55979556 55979577 IRF1 JASPAR yes 54997155
chr17 55979557 55979569 FOXC2 JASPAR yes 21261185
chr17 55979557 55979569 FOXC2 JASPAR yes 54997156
chr17 55979557 55979577 RREB1 JASPAR yes 21261186
chr17 55979557 55979577 RREB1 JASPAR yes 54997157
chr17 55979558 55979569 FOXP2 JASPAR yes 21261187
chr17 55979558 55979569 FOXP2 JASPAR yes 54997158
chr17 55979561 55979824 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773848
chr17 55979561 55979824 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274741
chr17 55979562 55979577 FOXP1 JASPAR yes 21261188
chr17 55979562 55979577 FOXP1 JASPAR yes 54997159
chr17 55979562 55979582 RREB1 JASPAR yes 21261189
chr17 55979562 55979582 RREB1 JASPAR yes 54997160
chr17 55979562 55979583 IRF1 JASPAR yes 21261190
chr17 55979562 55979583 IRF1 JASPAR yes 54997161
chr17 55979563 55979584 IRF1 JASPAR yes 21261191
chr17 55979563 55979584 IRF1 JASPAR yes 54997162
chr17 55979563 55979843 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773849
chr17 55979563 55979843 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274742
chr17 55979564 55979584 RREB1 JASPAR yes 21261192
chr17 55979564 55979584 RREB1 JASPAR yes 54997163
chr17 55979565 55979901 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773850
chr17 55979565 55979901 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274743
Genes associated with rs552317546[chr17:55979566], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More