EnhancerDB
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  3. rs552343288[chr16:81547637]
Enhancers that have rs552343288[chr16:81547637]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 81542851 81638595 enh16838
Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs552343288[chr16:81547637]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 81547621 81547642 IRF1 JASPAR yes 11838137
chr16 81547626 81547641 FOXP1 JASPAR yes 11838138
chr16 81547631 81547643 FOXC2 JASPAR yes 11838139
chr16 81547631 81547651 RREB1 JASPAR yes 11838140
chr16 81547633 81547653 RREB1 JASPAR yes 11838141
chr16 81547635 81547650 FOXP1 JASPAR yes 11838142
chr16 81547635 81547656 IRF1 JASPAR yes 11838143
chr16 81547637 81547652 IRF9 JASPAR yes 11838144
chr16 81547637 81547657 RREB1 JASPAR yes 11838145
Genes associated with rs552343288[chr16:81547637], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More