EnhancerDB
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  3. rs552392436[chr3:57781464]
Enhancers that have rs552392436[chr3:57781464]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 57767235 57798695 enh7245
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs552392436[chr3:57781464]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 57781457 57781464 NKX3-1 JASPAR yes 2646092
chr3 57781460 57781476 SOX4 JASPAR yes 2646093
Genes associated with rs552392436[chr3:57781464], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More