EnhancerDB
  1. Home
  2. SNP
  3. rs552535665[chr5:77805411]
Enhancers that have rs552535665[chr5:77805411]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs552535665[chr5:77805411]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77805401 77805415 GLIS2 JASPAR yes 63594424
chr5 77805401 77805415 GLIS3 JASPAR yes 63594425
Genes associated with rs552535665[chr5:77805411], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More