EnhancerDB
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  3. rs552549912[chr16:24999481]
Enhancers that have rs552549912[chr16:24999481]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 24992965 25014102 enh3954
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs552549912[chr16:24999481]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 24999474 24999488 GATA2 JASPAR yes 10092538
chr16 24999478 24999486 GATA3 JASPAR yes 10092539
Genes associated with rs552549912[chr16:24999481], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More