EnhancerDB
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  3. rs552563171[chr11:122582312]
Enhancers that have rs552563171[chr11:122582312]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 122527985 122597555 enh2064
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs552563171[chr11:122582312]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 122582298 122582313 TFAP2A JASPAR yes 42022908
chr11 122582299 122582314 TFAP2C JASPAR yes 42022909
chr11 122582301 122582313 TFAP2A JASPAR yes 42022910
chr11 122582301 122582313 TFAP2B JASPAR yes 42022911
chr11 122582301 122582313 TFAP2C JASPAR yes 42022912
chr11 122582301 122582316 TFAP2A JASPAR yes 42022913
chr11 122582303 122582312 TFAP2A JASPAR yes 42022915
chr11 122582308 122582312 LFA1 TRANSFAC yes 42022916
chr11 122582310 122582319 NKX2-8 JASPAR yes 42022917
Genes associated with rs552563171[chr11:122582312], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More