EnhancerDB
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  3. rs552628272[chr3:58026968]
Enhancers that have rs552628272[chr3:58026968]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552628272[chr3:58026968]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58026956 58026970 IRF8 JASPAR yes 2668180
chr3 58026963 58026974 CDX2 JASPAR yes 2668181
Genes associated with rs552628272[chr3:58026968], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More