EnhancerDB
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  3. rs552684979[chr16:85243394]
Enhancers that have rs552684979[chr16:85243394]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552684979[chr16:85243394]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85242966 85243409 ZNF274 GTRD no Liver (HepG2) 21721192
chr16 85243018 85243916 P63 GTRD no Skin (Keratinocyte) 21721193
chr16 85243130 85244007 P63 GTRD no Skin (Keratinocyte) 21721194
chr16 85243145 85243481 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21721195
chr16 85243147 85243857 P63 GTRD no Skin (Keratinocyte) 21721196
chr16 85243155 85243415 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21721197
chr16 85243157 85243421 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21721198
chr16 85243187 85243447 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21721200
chr16 85243199 85243463 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21721202
chr16 85243213 85243972 TCF7L2 GTRD no Colon (HCT116) 21721203
chr16 85243219 85243399 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21721204
chr16 85243281 85243935 ZNF143 GTRD no Epithelial (MCF-7) 21721205
chr16 85243298 85243903 ZNF143 GTRD no Epithelial (MCF-7) 21721206
chr16 85243308 85243975 P63 GTRD no Skin (Keratinocyte) 21721207
chr16 85243385 85243395 NHLH1 JASPAR yes 12033017
chr16 85243389 85243679 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21721208
Genes associated with rs552684979[chr16:85243394], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More