EnhancerDB
  1. Home
  2. SNP
  3. rs552687805[chr2:232531501]
Enhancers that have rs552687805[chr2:232531501]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 232527256 232532109 vista1014
VISTA
Transcript factors that have rs552687805[chr2:232531501]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232530763 232532304 POLR2A UCSC Txn Factor no Conserved 107690841
chr2 232530763 232532304 POLR2A UCSC Txn Factor no Conserved 108435726
chr2 232530763 232532304 POLR2A UCSC Txn Factor no Conserved 108435727
chr2 232530861 232531752 PHF8 UCSC Txn Factor no Conserved 107690842
chr2 232530861 232531752 PHF8 UCSC Txn Factor no Conserved 108435728
chr2 232530861 232531752 PHF8 UCSC Txn Factor no Conserved 108435729
chr2 232531057 232531706 TFAP2A UCSC Txn Factor no Conserved 107690845
chr2 232531057 232531706 TFAP2A UCSC Txn Factor no Conserved 108435732
chr2 232531057 232531706 TFAP2A UCSC Txn Factor no Conserved 108435733
chr2 232531494 232531510 ZNF143 JASPAR yes 68301525
chr2 232531494 232531510 ZNF143 JASPAR yes 81733796
Genes associated with rs552687805[chr2:232531501], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More