EnhancerDB
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  3. rs552694236[chr6:44000812]
Enhancers that have rs552694236[chr6:44000812]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552694236[chr6:44000812]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 44000803 44000816 SMAD2 JASPAR yes 101815272
chr6 44000806 44000816 TBR1 JASPAR yes 101815273
chr6 44000808 44000816 MGA JASPAR yes 101815274
chr6 44000808 44000816 TBX15 JASPAR yes 101815275
chr6 44000808 44000816 TBX1 JASPAR yes 101815276
chr6 44000808 44000816 TBX4 JASPAR yes 101815277
chr6 44000808 44000816 TBX5 JASPAR yes 101815278
Genes associated with rs552694236[chr6:44000812], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More