EnhancerDB
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  3. rs552699357[chr17:2776599]
Enhancers that have rs552699357[chr17:2776599]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs552699357[chr17:2776599]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2776586 2776601 MEF2C JASPAR yes 52780458
chr17 2776587 2776602 MEF2A JASPAR yes 52780459
chr17 2776588 2776600 MEF2B JASPAR yes 52780460
chr17 2776588 2776600 MEF2D JASPAR yes 52780461
chr17 2776594 2776609 MEF2C JASPAR yes 52780462
chr17 2776594 2776615 IRF1 JASPAR yes 52780463
chr17 2776595 2776610 FOXP1 JASPAR yes 52780464
chr17 2776595 2776616 IRF1 JASPAR yes 52780465
chr17 2776596 2776611 FOXP1 JASPAR yes 52780466
chr17 2776597 2776612 FOXP1 JASPAR yes 52780467
chr17 2776597 2776618 IRF1 JASPAR yes 52780468
chr17 2776598 2776613 FOXP1 JASPAR yes 52780469
chr17 2776598 2776619 IRF1 JASPAR yes 52780470
chr17 2776599 2776614 FOXP1 JASPAR yes 52780471
chr17 2776599 2776620 IRF1 JASPAR yes 52780472
Genes associated with rs552699357[chr17:2776599], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More