EnhancerDB
  1. Home
  2. SNP
  3. rs552720159[chr1:10115989]
Enhancers that have rs552720159[chr1:10115989]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10113864 10131352 enh11492
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552720159[chr1:10115989]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10115975 10115995 RREB1 JASPAR yes 26697454
chr1 10115977 10115992 STAT2 JASPAR yes 26697456
chr1 10115978 10115990 IRF1 JASPAR yes 26697457
chr1 10115978 10115993 FOXP1 JASPAR yes 26697458
chr1 10115978 10115999 IRF1 JASPAR yes 26697459
chr1 10115980 10116000 RREB1 JASPAR yes 26697460
chr1 10115983 10115995 IRF1 JASPAR yes 26697461
chr1 10115983 10115998 FOXP1 JASPAR yes 26697462
chr1 10115983 10116004 IRF1 JASPAR yes 26697463
chr1 10115985 10116005 RREB1 JASPAR yes 26697464
chr1 10115988 10116000 IRF1 JASPAR yes 26697465
chr1 10115988 10116003 FOXP1 JASPAR yes 26697466
chr1 10115988 10116009 IRF1 JASPAR yes 26697467
Genes associated with rs552720159[chr1:10115989], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More