EnhancerDB
  1. Home
  2. SNP
  3. rs552860706[chr9:38017490]
Enhancers that have rs552860706[chr9:38017490]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr9 38014305 38054668 enh10763
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr9 38017265 38017614 vista61936
VISTA
Transcript factors that have rs552860706[chr9:38017490]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr9 38017267 38017568 TEAD4 UCSC Txn Factor no Conserved 108550418
chr9 38017292 38017722 CTCF UCSC Txn Factor no Conserved 108550419
chr9 38017386 38017643 RAD21 UCSC Txn Factor no Conserved 108550420
chr9 38017483 38017495 PKNOX2 JASPAR yes 84023525
chr9 38017483 38017495 PKNOX2 JASPAR yes 95351770
chr9 38017489 38017500 STAT1 JASPAR yes 84023526
chr9 38017489 38017500 STAT3 JASPAR yes 84023527
chr9 38017489 38017500 STAT1 JASPAR yes 95351771
chr9 38017489 38017500 STAT3 JASPAR yes 95351772
Genes associated with rs552860706[chr9:38017490], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More