EnhancerDB
  1. Home
  2. SNP
  3. rs552861650[chr12:65047813]
Enhancers that have rs552861650[chr12:65047813]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65039765 65087550 enh2405
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552861650[chr12:65047813]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65047811 65047823 IRF1 JASPAR yes 121421388
chr12 65047811 65047828 ESR1 JASPAR yes 121421389
chr12 65047813 65047827 TLX1 JASPAR yes 121421390
Genes associated with rs552861650[chr12:65047813], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More