EnhancerDB
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  3. rs552886120[chr17:2095779]
Enhancers that have rs552886120[chr17:2095779]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2090104 2130255 enh4208
Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs552886120[chr17:2095779]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2094510 2096243 ZNF274 GTRD no Blood (GM12878) 21739523
chr17 2094510 2096243 ZNF274 GTRD no Blood (GM12878) 108230214
chr17 2094627 2095886 ZNF274 GTRD no Blood (GM12878) 21739524
chr17 2094627 2095886 ZNF274 GTRD no Blood (GM12878) 108230215
chr17 2094701 2095834 ZNF274 GTRD no Liver (HepG2) 108230216
chr17 2094784 2095832 ZNF274 GTRD no Liver (HepG2) 108230217
chr17 2094787 2095843 ZNF274 GTRD no Blood (GM12878) 21739525
chr17 2094787 2095843 ZNF274 GTRD no Blood (GM12878) 108230218
chr17 2095631 2096207 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21739526
chr17 2095631 2096207 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108230219
chr17 2095670 2096026 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108230220
chr17 2095684 2097160 ZNF274 GTRD no Blood (GM12878) 21739527
chr17 2095684 2097160 ZNF274 GTRD no Blood (GM12878) 108230221
chr17 2095693 2096209 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108230222
chr17 2095716 2096186 GATA2 UCSC Txn Factor no Conserved 108230223
chr17 2095746 2096110 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108230224
chr17 2095762 2096302 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21739528
chr17 2095762 2096302 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108230225
Genes associated with rs552886120[chr17:2095779], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More