EnhancerDB
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  3. rs552917833[chr1:168435890]
Enhancers that have rs552917833[chr1:168435890]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 168433465 168471139 enh12354
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs552917833[chr1:168435890]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 168435414 168435934 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21348056
chr1 168435522 168435922 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21348075
chr1 168435883 168435897 SPIC JASPAR yes 32927691
Genes associated with rs552917833[chr1:168435890], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More