EnhancerDB
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  3. rs552955619[chr1:8481642]
Enhancers that have rs552955619[chr1:8481642]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8427225 8493496 enh42
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552955619[chr1:8481642]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8481627 8481647 TP63 JASPAR yes 26552104
chr1 8481628 8481646 TP73 JASPAR yes 26552105
chr1 8481629 8481644 TP53 JASPAR yes 26552106
Genes associated with rs552955619[chr1:8481642], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More