EnhancerDB
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  3. rs552988550[chr17:41491291]
Enhancers that have rs552988550[chr17:41491291]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41479046 41498765 enh17167
Brain (SK-N-MC) Astrocyte Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs552988550[chr17:41491291]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41491275 41491296 IRF1 JASPAR yes 54344052
chr17 41491276 41491291 FOXP1 JASPAR yes 54344053
chr17 41491276 41491297 IRF1 JASPAR yes 54344054
chr17 41491277 41491292 FOXP1 JASPAR yes 54344055
chr17 41491278 41491293 FOXP1 JASPAR yes 54344056
Genes associated with rs552988550[chr17:41491291], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More