EnhancerDB
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  3. rs553008345[chr15:42210438]
Enhancers that have rs553008345[chr15:42210438]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553008345[chr15:42210438]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42210418 42210438 RREB1 JASPAR yes 23005040
chr15 42210420 42210440 RREB1 JASPAR yes 23005041
chr15 42210422 42210442 RREB1 JASPAR yes 23005042
Genes associated with rs553008345[chr15:42210438], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More