EnhancerDB
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  3. rs553019282[chr12:122595127]
Enhancers that have rs553019282[chr12:122595127]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122578829 122604895 enh2657
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs553019282[chr12:122595127]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122595122 122595132 ID4 JASPAR yes 124267204
chr12 122595122 122595132 TCF4 JASPAR yes 124267205
chr12 122595124 122595129 USF2 TRANSFAC yes 124267206
Genes associated with rs553019282[chr12:122595127], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More